Australian Institute of Marine Science. Long-Term Monitoring Program. https://www.aims.gov.au/research-topics/monitoring-and-discovery/monitoring-great-barrier-reef/long-term-monitoring-program (2024).
Hughes, T. P. et al. Global warming and recurrent mass bleaching of corals. Nature 543, 373–377 (2017).
Hoegh-Guldberg, O. Climate change, coral bleaching and the future of the world’s coral reefs. Mar. Freshw. Res. 50, 839–866 (1999).
Hughes, T. P. et al. Global warming transforms coral reef assemblages. Nature 556, 492–496 (2018).
Great Barrier Reef Marine Park Authority. Great Barrier Reef Outlook Report 2019 (Great Barrier Reef Marine Park Authority, 2019).
Hughes, T. P. et al. Coral reefs in the Anthropocene. Nature 546, 82–90 (2017).
Davis, K. L., Colefax, A. P., Tucker, J. P., Kelaher, B. P. & Santos, I. R. Global coral reef ecosystems exhibit declining calcification and increasing primary productivity. Commun. Earth Environ. 2, 105 (2021).
Westcott, D. A. et al. Relative efficacy of three approaches to mitigate Crown-of-Thorns Starfish outbreaks on Australia’s Great Barrier Reef. Sci. Rep. 10, 12594 (2020).
Mellin, C. et al. Spatial resilience of the Great Barrier Reef under cumulative disturbance impacts. Glob. Chang. Biol. 25, 2431–2445 (2019).
Jackson, J. B. C. et al. Historical overfishing and the recent collapse of coastal ecosystems. Science 293, 629–637 (2001).
Hoegh-Guldberg, O. & Smith, G. J. The effect of sudden changes in temperature, light and salinity on the population density and export of zooxanthellae from the reef corals Stylophora pistillata Esper and Seriatopora hystrix Dana. J. Exp. Mar. Biol. Ecol. 129, 279–303 (1989).
DeCarlo, T. M. et al. Acclimatization of massive reef-building corals to consecutive heatwaves. Proc. Biol. Sci. 286, 20190235 (2019).
McGowan, H. & Theobald, A. ENSO weather and coral bleaching on the Great Barrier Reef, Australia. Geophys. Res. Lett. 44, 10,601–10,607 (2017).
Zhao, W., Huang, Y., Siems, S. & Manton, M. The role of clouds in coral bleaching events over the Great Barrier Reef. Geophys. Res. Lett. 48, e2021GL093936 (2021).
Oxley, W. G., Emslie, M., Muir, P. & Thompson, A. Marine Surveys Undertaken in the Lihou Reef National Nature Reserve (Australian Institute of Marine Science, 2004).
DeCarlo, T. M. & Harrison, H. B. An enigmatic decoupling between heat stress and coral bleaching on the Great Barrier Reef. PeerJ 7, e7473 (2019).
UNESCO World Heritage Committee. Extended 44th Session of the World Heritage Committee, Fuzhou (China) 16–31 July 2021. Draft decision 44 COM 7B.90. https://whc.unesco.org/document/188005 (UNESCO, 2021).
UNESCO World Heritage Committee. Extended 45th Session of the World Heritage Committee, Riyadh (Saudi Arabia) 10–25 September 2023. Decision 45 COM 7B.13. https://whc.unesco.org/document/199654 (UNESCO, 2023).
IPCC. Summary for Policymakers. In Climate Change 2021: The Physical Science Basis. Contribution of Working Group I to the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (eds Masson-Delmotte, V. et al.) (Cambridge Univ. Press, 2021).
Kamenos, N. A. & Hennige, S. J. Reconstructing four centuries of temperature-induced coral bleaching on the Great Barrier Reef. Front. Mar. Sci. 5, 283 (2018).
Hoegh-Guldberg, O. et al. Commentary: reconstructing four centuries of temperature-induced coral bleaching on the Great Barrier Reef. Front. Mar. Sci. 6, 86 (2019).
DeCarlo, T. M. Commentary: reconstructing four centuries of temperature-induced coral bleaching on the Great Barrier Reef. Front. Mar. Sci. 7, 30 (2020).
Hendy, E. J. et al. Abrupt decrease in tropical Pacific sea surface salinity at end of Little Ice Age. Science 295, 1511–1514 (2002).
Calvo, E. et al. Interdecadal climate variability in the Coral Sea since 1708 A.D. Palaeogeogr. Palaeoclimatol. Palaeoecol. 248, 190–201 (2007).
Zinke, J. et al. North Flinders Reef (Coral Sea, Australia) Porites sp. corals as a candidate global boundary stratotype section and point for the Anthropocene series. Anthropocene Rev. 10, 201–224 (2023).
Spady, B. L. et al. Global Coral Bleaching Database (NCEI Accession 0228498) (NOAA National Centers for Environmental Information, 2022); https://www.ncei.noaa.gov/archive/accession/0228498.
Huang, B. et al. Extended reconstructed sea surface temperature, Version 5 (ERSSTv5): Upgrades, validations, and intercomparisons. J. Clim. 30, 8179–8205 (2017).
Rayner, N. A. et al. Global analyses of sea surface temperature, sea ice, and night marine air temperature since the late nineteenth century. J. Geophys. Res. Atmos. 108, 4407 (2003).
Eyring, V. et al. Overview of the Coupled Model Intercomparison Project Phase 6 (CMIP6) experimental design and organization. Geosci. Model Dev. 9, 1937–1958 (2016).
Gillett, N. P. et al. The Detection and Attribution Model Intercomparison Project (DAMIP v1.0) contribution to CMIP6. Geosci. Model Dev. 9, 3685–3697 (2016).
Hausfather, Z., Marvel, K., Schmidt, G. A., Nielsen-Gammon, J. W. & Zelinka, M. Climate simulations: recognize the ‘hot model’ problem. Nature 605, 26–29 (2022).
Hawkins, E. et al. Observed emergence of the climate change signal: from the familiar to the unknown. Geophys. Res. Lett. 47, e2019GL086259 (2020).
Gagan, M. K. et al. Temperature and surface-ocean water balance of the mid-Holocene tropical western Pacific. Science 279, 1014–1018 (1998).
Arzey, A. K. et al. Coral skeletal proxy records database for the Great Barrier Reef, Australia. Preprint at Earth Syst. Sci. Data https://doi.org/10.5194/essd-2024-159 (2024).
Brenner, L. D. et al. Coral record of Younger Dryas Chronozone warmth on the Great Barrier Reef. Paleoceanogr. Paleoclimatol. 35, e2020PA003962 (2020).
Furnas, M. J. & Mitchell, A. W. Nutrient inputs into the central Great Barrier Reef (Australia) from subsurface intrusions of Coral Sea waters: a two-dimensional displacement model. Cont. Shelf Res. 16, 1127–1148 (1996).
Wolanski, E., Andutta, F., Deleersnijder, E., Li, Y. & Thomas, C. J. The Gulf of Carpentaria heated Torres Strait and the Northern Great Barrier Reef during the 2016 mass coral bleaching event. Estuar. Coast. Shelf Sci. 194, 172–181 (2017).
Oliver, E. C. J. & Holbrook, N. J. Extending our understanding of South Pacific gyre ‘spin-up’: modeling the East Australian Current in a future climate. J. Geophys. Res. Oceans 119, 2788–2805 (2014).
DeCarlo, T. M. et al. Nutrient-supplying ocean currents modulate coral bleaching susceptibility. Sci. Adv. 6, eabc5493 (2020).
Wiedenmann, J. et al. Nutrient enrichment can increase the susceptibility of reef corals to bleaching. Nat. Clim. Chang. 3, 160–164 (2013).
Chan, D. & Huybers, P. Correcting observational biases in sea surface temperature observations removes anomalous warmth during World War II. J. Clim. 34, 4585–4602 (2021).
Chan, D., Kent, E. C., Berry, D. I. & Huybers, P. Correcting datasets leads to more homogeneous early-twentieth-century sea surface warming. Nature 571, 393–397 (2019).
Hughes, T. P. et al. Spatial and temporal patterns of mass bleaching of corals in the Anthropocene. Science 359, 80–83 (2018).
Hoegh-Guldberg, O. et al. Chapter 3: Impacts of 1.5°C global warming on natural and human systems. In Global Warming of 1.5°C (eds Masson-Delmotte, V. et al.) (IPCC, 2018).
Meinshausen, M. et al. Realization of Paris Agreement pledges may limit warming just below 2 °C. Nature 604, 304–309 (2022).
Matthews, H. D. & Wynes, S. Current global efforts are insufficient to limit warming to 1.5 °C. Science 376, 1404–1409 (2022).
Coles, S. L. et al. Evidence of acclimatization or adaptation in Hawaiian corals to higher ocean temperatures. PeerJ 6, e5347 (2018).
Hughes, T. P., Baird, A. H., Morrison, T. H. & Torda, G. Principles for coral reef restoration in the anthropocene. One Earth 6, 656–665 (2023).
Logan, C. A., Dunne, J. P., Ryan, J. S., Baskett, M. L. & Donner, S. D. Quantifying global potential for coral evolutionary response to climate change. Nat. Clim. Chang. 11, 537–542 (2021).
Dixon, A. M., Forster, P. M., Heron, S. F., Stoner, A. M. K. & Beger, M. Future loss of local-scale thermal refugia in coral reef ecosystems. PLOS Clim. 1, e0000004 (2022).
Coplen, T. B. Discontinuance of SMOW and PDB. Nature 375, 285 (1995).
van Albada, S. J. & Robinson, P. A. Transformation of arbitrary distributions to the normal distribution with application to EEG test-retest reliability. J. Neurosci. Methods 161, 205–211 (2007).
Emile-Geay, J. & Tingley, M. Inferring climate variability from nonlinear proxies: application to palaeo-ENSO studies. Clim. Past 12, 31–50 (2016).
Barnes, D. J., Taylor, R. B. & Lough, J. M. On the inclusion of trace materials into massive coral skeletons. Part II: distortions in skeletal records of annual climate cycles due to growth processes. J. Exp. Mar. Biol. Ecol. 194, 251–275 (1995).
Gagan, M. K., Dunbar, G. B. & Suzuki, A. The effect of skeletal mass accumulation in Porites on coral Sr/Ca and δ18O paleothermometry. Paleoceanogr. Paleoclimatol. 27, PA1203 (2012).
Schneider, T. Analysis of incomplete climate data: estimation of mean values and covariance matrices and imputation of missing values. J. Clim. 14, 853–871 (2001).
PAGES 2k Consortium. Consistent multidecadal variability in global temperature reconstructions and simulations over the Common Era. Nat. Geosci. 12, 643–649 (2019).
Cook, E. R., Briffa, K. R. & Jones, P. D. Spatial regression methods in dendroclimatology: a review and comparison of two techniques. Int. J. Climatol. 14, 379–402 (1994).
Nash, J. E. & Sutcliffe, J. V. River flow forecasting through conceptual models part I − a discussion of principles. J. Hydrol. 10, 282–290 (1970).
Otto-Bliesner, B. L. et al. Climate variability and change since 850 CE: an ensemble approach with the Community Earth System Model. Bull. Am. Meteorol. Soc. 97, 735–754 (2016).
Evans, M. N., Kaplan, A. & Cane, M. A. Optimal sites for coral-based reconstruction of global sea surface temperature. Paleoceanogr. Paleoclimatol. 13, 502–516 (1998).
Russon, T., Tudhope, A. W., Hegerl, G. C., Collins, M. & Tindall, J. Inter-annual tropical Pacific climate variability in an isotope-enabled CGCM: Implications for interpreting coral stable oxygen isotope records of ENSO. Clim. Past 9, 1543–1557 (2013).
PAGES Hydro2k Consortium. Comparing proxy and model estimates of hydroclimate variability and change over the Common Era. Clim. Past 13, 1851–1900 (2017).
Freund, M. B. et al. Higher frequency of Central Pacific El Niño events in recent decades relative to past centuries. Nat. Geosci. 12, 450–455 (2019).
Gagan, M. K. et al. New views of tropical paleoclimates from corals. Quat. Sci. Rev. 19, 45–64 (2000).
Thompson, D. M., Ault, T. R., Evans, M. N., Cole, J. E. & Emile-Geay, J. Comparison of observed and simulated tropical climate trends using a forward model of coral δ18O. Geophys. Res. Lett. 38, L14706 (2011).
LeGrande, A. N. & Schmidt, G. A. Global gridded data set of the oxygen isotopic composition in seawater. Geophys. Res. Lett. 33, L12604 (2006).
Reed, E. V., Thompson, D. M. & Anchukaitis, K. J. Coral-based sea surface salinity reconstructions and the role of observational uncertainties in inferred variability and trends. Paleoceanogr. Paleoclimatol. 37, e2021PA004371 (2022).
Khaliq, M. N., Ouarda, T. B. M. J., Gachon, P., Sushama, L. & St-Hilaire, A. Identification of hydrological trends in the presence of serial and cross correlations: A review of selected methods and their application to annual flow regimes of Canadian rivers. J. Hydrol. 368, 117–130 (2009).
Mahlstein, I., Hegerl, G. & Solomon, S. Emerging local warming signals in observational data. Geophys. Res. Lett. 39, L21711 (2012).
Freeman, E. et al. ICOADS Release 3.0: a major update to the historical marine climate record. Int. J. Climatol. 37, 2211–2232 (2017).
Huang, B. et al. Uncertainty estimates for sea surface temperature and land surface air temperature in NOAAGlobalTemp version 5. J. Clim. 33, 1351–1379 (2020).
Druffel, E. R. M. & Griffin, S. Variability of surface ocean radiocarbon and stable isotopes in the southwestern Pacific. J. Geophys. Res. 104, 23607–23613 (1999).
DeLong, K. L., Quinn, T. M., Taylor, F. W., Lin, K. & Shen, C.-C. Sea surface temperature variability in the southwest tropical Pacific since AD 1649. Nat. Clim. Change 2, 799–804 (2012).
Quinn, T. et al. A multicentury stable isotope record from a New Caledonia coral: Interannual and decadal SST variability in the southwest Pacific since 1657. Paleoceanography 13, 412–426 (1998).
Quinn, T. M., Crowley, T. J. & Taylor, F. W. New stable isotope results from a 173-year coral from Espiritu Santo, Vanuatu. Geophys. Res. Lett. 23, 3413–3416 (1996).
Alibert, C. & Kinsley, L. A 170-year Sr/Ca and Ba/Ca coral record from the western Pacific warm pool: 1. What can we learn from an unusual coral record? J. Geophys. Res. Oceans 113, C04008 (2008).
Tudhope, A. W. et al. Variability in the El Niño-Southern Oscillation through a glacial-interglacial cycle. Science 291, 1511–1517 (2001).
Urban, F. E., Cole, J. E. & Overpeck, J. T. Influence of mean climate change on climate variability from a 155-year tropical Pacific coral record. Nature 407, 989–993 (2000).
Guilderson, T. P. & Schrag, D. P. Reliability of coral isotope records from the western Pacific warm pool: A comparison using age-optimized records. Paleoceanography 14, 457–464 (1999).
Quinn, T. M., Taylor, F. W. & Crowley, T. J. Coral-based climate variability in the Western Pacific Warm Pool since 1867. J. Geophys. Res. 111, C11006 (2006).
Gorman, M. K. et al. A coral-based reconstruction of sea surface salinity at Sabine Bank, Vanuatu from 1842 to 2007 CE. Paleoceanography 27, PA3226 (2012).
Bagnato, S., Linsley, B. K., Howe, S. S., Wellington, G. M. & Salinger, J. Coral oxygen isotope records of interdecadal climate variations in the South Pacific Convergence Zone region. Geochem. Geophys. Geosyst. 6, Q06001 (2005).
Linsley, B. K. et al. Tracking the extent of the South Pacific Convergence Zone since the early 1600s. Geochem. Geophys. Geosyst. 7, Q05003 (2006).
Cole, J. E., Fairbanks, R. G. & Shen, G. T. Recent variability in the Southern Oscillation: Isotopic results from a Tarawa Atoll coral. Science 260, 1790–1793 (1993).
Dassié, E. P. et al. A Fiji multi-coral δ18O composite approach to obtaining a more accurate reconstruction of the last two-centuries of the ocean-climate variability in the South Pacific Convergence Zone region. Paleoceanography 29, 1196–1213 (2014).
Carton, J. A., Chepurin, G. A. & Chen, L. SODA3: A new ocean climate reanalysis. J. Clim. 31, 6967–6983 (2018).
Zuo, H., Balmaseda, M. A., Tietsche, S., Mogensen, K. & Mayer, M. The ECMWF operational ensemble reanalysis-analysis system for ocean and sea ice: A description of the system and assessment. Ocean Sci. 15, 779–808 (2019).
Cheng, L. et al. Improved estimates of changes in upper ocean salinity and the hydrological cycle. J. Clim. 33, 10357–10381 (2020).
Thompson, D. M. et al. Identifying hydro‐sensitive coral δ18O records for improved high‐resolution temperature and salinity reconstructions. Geophys. Res. Lett. 49, e2021GL096153 (2022).
Wu, Y., Fallon, S. J., Cantin, N. E. & Lough, J. M. Assessing multiproxy approaches (Sr/Ca, U/Ca, Li/Mg, and B/Mg) to reconstruct sea surface temperature from coral skeletons throughout the Great Barrier Reef. Sci. Total Environ. 786, 147393 (2021).
Sadler, J., Webb, G. E., Leonard, N. D., Nothdurft, L. D. & Clark, T. R. Reef core insights into mid-Holocene water temperatures of the southern Great Barrier Reef. Paleoceanography 31, 1395–1408 (2016).
Roche, R. C. et al. Mid-Holocene sea surface conditions and riverine influence on the inshore Great Barrier Reef. Holocene 24, 885–897 (2014).
Reed, E. V., Cole, J. E., Lough, J. M., Thompson, D. & Cantin, N. E. Linking climate variability and growth in coral skeletal records from the Great Barrier Reef. Coral Reefs 38, 29–43 (2019).
Razak, T. B. et al. Use of skeletal Sr/Ca ratios to determine growth patterns in a branching coral Isopora palifera. Mar. Biol. 164, 96 (2017).
Marshall, J. F. Decadal-scale, High Resolution Records of Sea Surface Temperature in the Eastern Indian and South Western Pacific Oceans from Proxy Records of the Strontium/calcium Ratio of Massive Porites Corals PhD thesis, Australian National Univ. (2000).
Marshall, J. F. & McCulloch, M. T. An assessment of the Sr/Ca ratio in shallow water hermatypic corals as a proxy for sea surface temperature. Geochim. Cosmochim. Acta 66, 3263–3280 (2002).
Gagan, M. K. et al. Coral oxygen isotope evidence for recent groundwater fluxes to the Australian Great Barrier Reef. Geophys. Res. Lett. 29, 43-1–43-4 (2002).
D’Olivo, J. P., Sinclair, D. J., Rankenburg, K. & McCulloch, M. T. A universal multi-trace element calibration for reconstructing sea surface temperatures from long-lived Porites corals: Removing ‘vital-effects’. Geochim. Cosmochim. Acta 239, 109–135 (2018).
Fallon, S. J., McCulloch, M. T. & Alibert, C. Examining water temperature proxies in Porites corals from the Great Barrier Reef: a cross-shelf comparison. Coral Reefs 22, 389–404 (2003).
Brenner, L. D., Linsley, B. K. & Potts, D. C. A modern Sr/Ca-δ18O-sea surface temperature calibration for Isopora corals on the Great Barrier Reef. Paleoceanography 32, 182–194 (2017).
Alibert, C. et al. Source of trace element variability in Great Barrier Reef corals affected by the Burdekin flood plumes. Geochim. Cosmochim. Acta 67, 231–246 (2003).
Murty, S. A. et al. Spatial and temporal robustness of Sr/Ca-SST calibrations in Red Sea corals: Evidence for influence of mean annual temperature on calibration slopes. Paleoceanogr. Paleoclimatol. 33, 443–456 (2018).
Sayani, H. R., Cobb, K. M., DeLong, K., Hitt, N. T. & Druffel, E. R. M. Intercolony δ18O and Sr/Ca variability among Porites spp. corals at Palmyra Atoll: Toward more robust coral-based estimates of climate. Geochem. Geophys. Geosyst. 20, 5270–5284 (2019).
Otto, F. E. L. Geert Jan van Oldenborgh 1961–2021. Nat. Clim. Chang. 11, 1017 (2021).